PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0029s0094.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 195aa    MW: 21876.2 Da    PI: 10.5746
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0029s0094.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2157.1e-057292323
                         ETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                         C+ C+k F r  nL+ H r H
  Kaladp0029s0094.1.p 72 CEVCNKGFQRDQNLQLHRRGH 92
                         *******************88 PP
2zf-C2H212.70.00037147169123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          +kC +C+k +  ks+ k H + +
  Kaladp0029s0094.1.p 147 WKCDKCSKKYAVKSDWKAHSKIC 169
                          58*****************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MSQGLSPVPS SILGFVGDQS KNPDSSNSPA TQPSASSSTL KRKRSLPGTP DPDSEVIALS  60
PTSLMATNRF LCEVCNKGFQ RDQNLQLHRR GHNLPWKLKQ RSNKEVVKKK VYICPEKSCV  120
HHDPSRALGD LTGIKKHFSR KHGEKKWKCD KCSKKYAVKS DWKAHSKICG KERNDTECML  180
RLCLAKKQFS RKEK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G45260.13e-76C2H2 family protein