PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0029s0097.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WOX

Protein Properties

Length: 122aa MW: 13767 Da PI: 10.6639

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0029s0097.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.4	2.8e-19	12	73	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r++R+++t+eq+ Lee+++ r+psa ++ +++++l +++ ++V++WFqN++a++k+ Kaladp0029s0097.1.p 12 RSSRWCPTAEQVMLLEEMYKGgLRNPSAGQIHQITAHLsnfgKVQGKNVFYWFQNHKARDKQ 73 689***************99************************************97 PP
2	Wus_type_Homeobox	111.3	5.1e-36	13	74	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++RW+Pt+eQ+++Lee+yk Glr+P++ +i++ita+L+++Gk+++kNVfyWFQN+kaR++q+ Kaladp0029s0097.1.p 13 SSRWCPTAEQVMLLEEMYKGGLRNPSAGQIHQITAHLSNFGKVQGKNVFYWFQNHKARDKQR 74 79***********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 122 aa Download sequence
MCPAGTSASL SRSSRWCPTA EQVMLLEEMY KGGLRNPSAG QIHQITAHLS NFGKVQGKNV 60 FYWFQNHKAR DKQRLKKKLP LKPQHQQIFF HATSSFSPQR PVSCISFAGP LIFTPQVYIY 120 I*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	9e-30	WOX family protein