PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0031s0028.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 201aa    MW: 22895.7 Da    PI: 7.5658
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0031s0028.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.27e-192882357
                         --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
             Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                         k+ ++t +qle Le+ F ++ +++ +++ +LA+ lgL+ rq+ vWFqNrRa++k+
  Kaladp0031s0028.1.p 28 KKKRLTCDQLESLEKSFLEEIKLDPDRKIRLARDLGLQPRQIAVWFQNRRARWKN 82
                         5567999**********************************************95 PP
2HD-ZIP_I/II116.71.3e-3728118292
          HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                          kk+rl+ +q+++LE+sF ee kL+p+rK +lar+Lglqprq+avWFqnrRAR+k+kq+E+ y+aLk++y+ +++e+++L++ev +L++ l
  Kaladp0031s0028.1.p  28 KKKRLTCDQLESLEKSFLEEIKLDPDRKIRLARDLGLQPRQIAVWFQNRRARWKNKQIERLYDALKQEYEVVAREKQKLQDEVVKLQAML 117
                          9****************9999******************************************************************988 PP

          HD-ZIP_I/II  92 k 92 
                          +
  Kaladp0031s0028.1.p 118 R 118
                          7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MEKNNQKLSN SNSETNDHNY CGNNMQDKKK RLTCDQLESL EKSFLEEIKL DPDRKIRLAR  60
DLGLQPRQIA VWFQNRRARW KNKQIERLYD ALKQEYEVVA REKQKLQDEV VKLQAMLREH  120
GVRNQVSATG YTEVSGEDTI ESAAVVVGNS RPQPAAPLLT GPHQIEETNY PQAADQGYTP  180
LPVQPGYWQG GGIHQLPPYP *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17684RRARWKNKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03790.12e-54HD-ZIP family protein