PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0031s0041.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 574aa MW: 62929.7 Da PI: 6.3688

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0031s0041.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.9	2.7e-30	327	385	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gC+v+k+v+r+aed +++++tYeg+Hnh+ Kaladp0031s0041.1.p 327 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCTVRKQVQRCAEDRTILITTYEGNHNHP 385 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MDNTTTTATT LNNTTTTRPP SNPSPSIHFP LNLNHMNQQH DDHVDLRLNS NNDHRHQHRV 60 IDEMDFFADD RTNKDGSHKQ QACTDIDHQN MTTPPADHQS THFNYVNTGL HLLTANTSTT 120 DQSMVDDGSS PATDDTRAKN EIVMLRAEIE RVDRENQELK EMLSHVTKSY STMQVHLMTL 180 MEESQKKDAH AQQQLHVKHR QEDKQQIEVG TSRLVQKQLV VDLGLVPASD IHDQQSLSSS 240 ENNEDGRSNS PPTNSEVASR LQMEEEAEIT RREISMGMGR EEEAVHVSPN KVPRFNPSKT 300 NNADQAEATM RKARVSVRAR SEATMITDGC QWRKYGQKMA KGNPCPRAYY RCTMAAGCTV 360 RKQVQRCAED RTILITTYEG NHNHPLPPAA MAMASTTSSA AHMLLSGSMS STDGLMNPNF 420 LARTLLPCSS NMATISASAP FPTVTLDLTQ DPNAATQPPP NTIQSQFQNP SQNLALLPQL 480 FTQTLYNQSM FSGLQMSQHR DSSLGPKQQG PLADSVTAAA IAADPNFTAV IAAAISSMIG 540 NSHPINNITT NSSNSNGNNS GANIVSSSGI PEN*

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MDNTTTTATT LNNTTTTRPP SNPSPSIHFP LNLNHMNQQH DDHVDLRLNS NNDHRHQHRV  60
IDEMDFFADD RTNKDGSHKQ QACTDIDHQN MTTPPADHQS THFNYVNTGL HLLTANTSTT  120
DQSMVDDGSS PATDDTRAKN EIVMLRAEIE RVDRENQELK EMLSHVTKSY STMQVHLMTL  180
MEESQKKDAH AQQQLHVKHR QEDKQQIEVG TSRLVQKQLV VDLGLVPASD IHDQQSLSSS  240
ENNEDGRSNS PPTNSEVASR LQMEEEAEIT RREISMGMGR EEEAVHVSPN KVPRFNPSKT  300
NNADQAEATM RKARVSVRAR SEATMITDGC QWRKYGQKMA KGNPCPRAYY RCTMAAGCTV  360
RKQVQRCAED RTILITTYEG NHNHPLPPAA MAMASTTSSA AHMLLSGSMS STDGLMNPNF  420
LARTLLPCSS NMATISASAP FPTVTLDLTQ DPNAATQPPP NTIQSQFQNP SQNLALLPQL  480
FTQTLYNQSM FSGLQMSQHR DSSLGPKQQG PLADSVTAAA IAADPNFTAV IAAAISSMIG  540
NSHPINNITT NSSNSNGNNS GANIVSSSGI PEN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-115	WRKY family protein