PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0031s0057.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 781aa    MW: 85848.1 Da    PI: 5.415
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0031s0057.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.31.8e-20103158156
                          TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  Kaladp0031s0057.1.p 103 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 158
                          688999***********************************************999 PP
2START208.72.3e-652985191206
                          HHHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S... CS
                START   1 elaeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla... 77 
                          ela +a++el+++a+ +ep+Wv s+     + +n+de+ ++f +  +     + +ea+r+++vv m++a+lve+l++ + qW  ++    
  Kaladp0031s0057.1.p 298 ELAVAAMEELLRMAQMSEPLWVPSVdgsgsSLLNEDEYNRIFHRCIGptpdgFISEASRDTAVVMMNHANLVEILMEAN-QWMSMFSaii 386
                          57899**********************999999*********9888899*99***************************.********** PP

                          .EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECT CS
                START  78 .kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksn 159
                           +a+tlevis+g      galq+m+ae+q+ +plvp R+ +fvRy++q+g+g+w++vdvS+d  ++ p    v+R++++pSg+li++ +n
  Kaladp0031s0057.1.p 387 sRAMTLEVISTGvaenfnGALQVMTAEMQLATPLVPtREIYFVRYCKQHGDGVWAVVDVSLDTLRPSP----VARCRKRPSGCLIQEIPN 472
                          ******************************************************************98....7***************** PP

                          CEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
                START 160 ghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                          g+skvtwve+v+++ r +h+l+++lv+sgla+ga++wv tl+rqce+
  Kaladp0031s0057.1.p 473 GYSKVTWVENVEVDVRGVHNLYKPLVNSGLAFGARRWVGTLDRQCER 519
                          *********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 781 aa     Download sequence    
MPAGIMLPAT MIGINGDNIN NVDSFVNSSL GQMNMFQQNL MMDPQQPYHH SLDMMNPNNM  60
NTHSNGLETD HLNDFESKSG SENLEGVSGD DQTDPNQQPN KKKKRYHRHT QHQIQEMEAF  120
FKECPHPDDK QRKELSRELG LEPLQVKFWF QNKRTQMKTQ HERHENTQLR NENEKLRAEN  180
MRYREALANA SCPQCGGPTA IGEMSFDEHQ LRLENARLRE EVDKISAIAA KYVGKPLNNH  240
SSPLLSPPVP SRSLELVFPF SGGATMGGGE MLGPASDHLI RSISEQQPIE ADKPVIVELA  300
VAAMEELLRM AQMSEPLWVP SVDGSGSSLL NEDEYNRIFH RCIGPTPDGF ISEASRDTAV  360
VMMNHANLVE ILMEANQWMS MFSAIISRAM TLEVISTGVA ENFNGALQVM TAEMQLATPL  420
VPTREIYFVR YCKQHGDGVW AVVDVSLDTL RPSPVARCRK RPSGCLIQEI PNGYSKVTWV  480
ENVEVDVRGV HNLYKPLVNS GLAFGARRWV GTLDRQCERL ASSMATYIPN GEEVFTNDEG  540
RRNMMKLADR MVMSFSAGVS ASITHTWTTL SGTGADDVRV MTRKSIDDPG RPPGIVLSAA  600
TSFWIAVPPS RVFDFLRDEN HRSQWDILCD GGVVHEMAHI ANGREAGNCI SLLRVNGANA  660
NQSNMLVLQE SCTEATASFV IYAPVDFGAM NSVLSGGDPE YVPLLPSGFA IYPDGPVGQR  720
GHGEAVGPKG AGGSLLTVAF QILVDSQPAA KLSLGSVATV NQLISSTVER IKEALTGESS  780
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein