PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0031s0093.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 721aa MW: 78225.9 Da PI: 6.5373

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0031s0093.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	33.1	1.4e-10	271	327	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +++Aa+a++ a++k++g Kaladp0031s0093.1.p 271 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEDKAARAYDLAALKYWG 327 57*****************4444.2455535555.7799999***********98 PP
2	AP2	46.6	8.3e-15	370	421	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Kaladp0031s0093.1.p 370 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 421 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 721 aa Download sequence
MSAATDECFD LSSSSARPQP PHPFGVLDEA SAGFSDRNNS NTTNQQTHDW NSAENGCYKT 60 TTSEMSTLMG SSCNNNSNNG SQSLQDQHLP KLENFLGSHS FSNNHYHHHS TAAGDYMFST 120 ESMPETAAHN NNNNQAFNSN NNSIGLSMIK TWLRSNQAAG TGQMQQPLQQ QIPNSNEIFN 180 NNMSSGDGDS GREALCGVDN NNTSNKALTG AQTLSLSMST GSQSNSSAPL PLLDGGDGVD 240 MQQKTALDSQ TGAVVEAVPR KSLDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQT 300 RKGRQGGYDK EDKAARAYDL AALKYWGTTT TTNFPISSYE KELEEMKHMT RQEYVASLRR 360 KSSGFSRGAS IYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR 420 GLNAVTNFDM NRYDVNSILE SSTLPIGGAA KRLKDAEQAI ELTGAMEGLI SQRSALNHDS 480 VGSHLSDGMS YGSSGQWPTI AFHHPPYNNA MHQHYSPYAR VWCKQEQDST SEGTTHQSFQ 540 DFHQLQLGSS GATHNFLQQP TTSVLHNLMS LDSASMEHSS GSNSVIYGNG ESNGTGYGAG 600 GGYGASVNNN GGFVMPVGSA LMGNEDNNSE VKASGYATEN IYGNTNAYNQ ARTLYYLQQQ 660 QQQSLFKGGG YDQDSGCNSW VPTGIPCSGP KGTGGNTNNT AATCHVAGNQ PFTVWNETWK 720 *

Sequence ? help Back to Top

Protein Sequence Length: 721 aa Download sequence

MSAATDECFD LSSSSARPQP PHPFGVLDEA SAGFSDRNNS NTTNQQTHDW NSAENGCYKT  60
TTSEMSTLMG SSCNNNSNNG SQSLQDQHLP KLENFLGSHS FSNNHYHHHS TAAGDYMFST  120
ESMPETAAHN NNNNQAFNSN NNSIGLSMIK TWLRSNQAAG TGQMQQPLQQ QIPNSNEIFN  180
NNMSSGDGDS GREALCGVDN NNTSNKALTG AQTLSLSMST GSQSNSSAPL PLLDGGDGVD  240
MQQKTALDSQ TGAVVEAVPR KSLDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQT  300
RKGRQGGYDK EDKAARAYDL AALKYWGTTT TTNFPISSYE KELEEMKHMT RQEYVASLRR  360
KSSGFSRGAS IYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR  420
GLNAVTNFDM NRYDVNSILE SSTLPIGGAA KRLKDAEQAI ELTGAMEGLI SQRSALNHDS  480
VGSHLSDGMS YGSSGQWPTI AFHHPPYNNA MHQHYSPYAR VWCKQEQDST SEGTTHQSFQ  540
DFHQLQLGSS GATHNFLQQP TTSVLHNLMS LDSASMEHSS GSNSVIYGNG ESNGTGYGAG  600
GGYGASVNNN GGFVMPVGSA LMGNEDNNSE VKASGYATEN IYGNTNAYNQ ARTLYYLQQQ  660
QQQSLFKGGG YDQDSGCNSW VPTGIPCSGP KGTGGNTNNT AATCHVAGNQ PFTVWNETWK  720
*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-127	AP2 family protein