PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0031s0130.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 530aa    MW: 58254.6 Da    PI: 4.8464
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0031s0130.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS416.91.8e-1271565171373
                 GRAS   1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88 
                          lv++L++cAe ++ gdl+la +l+ +++ l  + ++   + ++aayf+ AL++r++      +  l+   t+     e+   ++ ++e++
  Kaladp0031s0130.1.p 156 LVHTLMTCAEWLQRGDLRLAGTLVDEMRSLleRVNSSCGIWKVAAYFVDALNRRVFC-----AGGLSL--TT---PYENEILYHHYYEAC 235
                          689**************************976666667999***************8.....323333..33...3455567789***** PP

                 GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfef 178
                          P+lkf+h+taNqaIlea+eg+++vH++Df++++GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++ ++ l+e+g+rLa++A++++v+f f
  Kaladp0031s0130.1.p 236 PYLKFAHFTANQAILEAFEGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPVLRLTGIGPPSPDGRDPLREIGHRLAELARSVNVRFAF 325
                          ****************************************************************************************** PP

                 GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
                          + ++a rled+++++L+v+ +Ea+aVn+++q hrll+++   + ++d+vL  ++sl+Pk+v+v+eqea+hn+++Fl+rf+eal+yys++f
  Kaladp0031s0130.1.p 326 RGVAAPRLEDVRPWMLQVSANEAVAVNSIMQFHRLLASDSIHAPPIDSVLTWIRSLNPKIVTVIEQEANHNQPQFLDRFTEALYYYSTMF 415
                          **9999******************************99988888********************************************** PP

                 GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgsl 358
                          dslea++p   ++++ + +++l+rei++v++ceg++r+erhe l+ Wr r++e+GFkp++l+++a kqa++ll  ++ +gy+vee++g+l
  Kaladp0031s0130.1.p 416 DSLEAGAP---QAEKQLAEVYLQREICDVLCCEGSAREERHEPLAMWRIRFTESGFKPLHLGSNAFKQASMLLTLFSAEGYSVEENEGCL 502
                          ******64...5667788899********************************************************************* PP

                 GRAS 359 vlgWkdrpLvsvSaW 373
                          +lgW++rpL+s+SaW
  Kaladp0031s0130.1.p 503 TLGWHSRPLISASAW 517
                          *************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    
MAQYETSSSS TASSGSSSSC LTGKLAAAPE IDGQLAGAGY RVRSSELNQV AQRLERLETV  60
MVSAPSDVSQ LASDAVHYNP SDLAAWVDSL LSEFSQPQLD QLQSQPSNYS DLGYQDDGVV  120
GVAVSELQYP TAAMGESWTH APPQVDVVEE DSGIRLVHTL MTCAEWLQRG DLRLAGTLVD  180
EMRSLLERVN SSCGIWKVAA YFVDALNRRV FCAGGLSLTT PYENEILYHH YYEACPYLKF  240
AHFTANQAIL EAFEGHDCVH VVDFNLMHGL QWPALIQALA LRPGGPPVLR LTGIGPPSPD  300
GRDPLREIGH RLAELARSVN VRFAFRGVAA PRLEDVRPWM LQVSANEAVA VNSIMQFHRL  360
LASDSIHAPP IDSVLTWIRS LNPKIVTVIE QEANHNQPQF LDRFTEALYY YSTMFDSLEA  420
GAPQAEKQLA EVYLQREICD VLCCEGSARE ERHEPLAMWR IRFTESGFKP LHLGSNAFKQ  480
ASMLLTLFSA EGYSVEENEG CLTLGWHSRP LISASAWHAD VTSAAAASR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-152GRAS family protein