PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0032s0054.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TCP

Protein Properties

Length: 249aa MW: 25641.9 Da PI: 10.1454

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0032s0054.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	120.9	1.4e-37	32	116	3	88
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88 kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++ ++s s +++sss+ Kaladp0032s0054.1.p 32 LKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTIPANFS-TVSASLRGAASSSA 116 699*****************************************************************888.33333333333322 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MSTSADGGGG PPSNGGGGGL VAVVSDKSHL PLKKPPAKDR HSKVDGRGRR IRMPIICAAR 60 VFQLTRELGH KSDGQTIEWL LRQAEPSIIA ATGTGTIPAN FSTVSASLRG AASSSAPAPL 120 HHQLLAPTPF ILGKRLRADD DVESSDGAAK EAGPTTGGFW AVPARPDLGQ IWSFAGGAPE 180 LVMAAPSSQG MMMSAGRFVQ AMGEASVARV GNYLPMATTQ GHLDLLASLS ANGSSNSGRR 240 DEHHSDHR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	2e-73	TCP family protein