PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0032s0111.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family FAR1
Protein Properties Length: 256aa    MW: 29190 Da    PI: 9.0343
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0032s0111.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR173.54.5e-2361146287
                 FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 
                          fYn+Y+ + GF +r++ + ks++n+e+++ +fvC+k+g+r+ ++k+   k  +++ +tr+gC ak+k++++ + +w v+k++  HnH
  Kaladp0032s0111.1.p  61 FYNDYSLNHGFGIRIHGHIKSRTNQEVIRWQFVCNKQGHRNLKDKRqLGKDVKPHRQTRVGCMAKMKITLR-NCEWIVDKFDDIHNH 146
                          ****************************************9988875678899******************.9************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MDHIEKGVDQ LAPNDTSNKY EKGGDEANCE NSDVNILSHI EPMNSSIIGK VFASKDDAYT  60
FYNDYSLNHG FGIRIHGHIK SRTNQEVIRW QFVCNKQGHR NLKDKRQLGK DVKPHRQTRV  120
GCMAKMKITL RNCEWIVDKF DDIHNHVPTT PSKVMKHQSH NKFHQTSIVK NLVYELNKKG  180
MKPSTITRVV NAISCSEEVE ITSKQCSDML RAERKNHVGR ECHGIVRHFH EKSQSDGSHY  240
FAMDLASDGS LKSVF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-21FAR1 family protein