PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0032s0175.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 196aa    MW: 20646.1 Da    PI: 5.642
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0032s0175.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF41.71.5e-131259249
                         ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
               SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                         +i + s+r vt++kRr+g++KK   L+ L++  +a i+fs+ g+ y +
  Kaladp0032s0175.1.p 12 PIHDISRRRVTLTKRRQGLFKKMDKLCKLTGCTAAAIVFSTAGRPYSF 59
                         68899**************************************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MGTGRKRIEI HPIHDISRRR VTLTKRRQGL FKKMDKLCKL TGCTAAAIVF STAGRPYSFG  60
DLSLFDAFTG SEGQGREDGG GYHLGGSRLG LGRVSEPEGV DGSTGSGVEG GPSTSYSQEI  120
GGGGGDGDGS FQLGFGESEG VNDLDGFMEE LSSLLEMRSK VFARLNRHVE GFGGDFLPPQ  180
PLSIIEIDAP PLPLH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72350.13e-12M-type_MADS family protein