PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0032s0311.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 466aa MW: 52097.8 Da PI: 9.1947

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0032s0311.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	56.2	8.5e-18	122	171	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta +Aa+a+++a++k++g Kaladp0032s0311.1.p 122 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHDAARAYDRAALKFRG 171 78*****************......55**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MMLDLNLMVA EEEVVHMAAE KFSKSCGTSN SSIANVTEAD EDSCSRAGET PYFNLSVGRE 60 KMNTIELFPM RMAVGDFGDE GLKKKQMDIS FNQNGSSKVK EVQQLQPLVA RKSRRGPRSR 120 SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHDAAR AYDRAALKFR GVEADINFNP 180 VDYDEDMKKM VNLTKEQFVH ILRRQSTGFA RGSSKYRGVT LHKCWRWEAR MGQFLGKKAY 240 DSAAIECNGR EAFTNFAPIT YGGGTTFERN SLGTIFISLL KENLGLNKSP SNCVVTEGCD 300 QHLNLNLSIS LPSSGYEPTE KQVSVHPHPK YIYHPYSLLD ARKPNVDEPS SGGHSRLSLY 360 PQLLFNAEVQ APNKRNEQNS HFQSFPNWTW KLNGQASPAP MRLLSSAASS GFSSPALSVP 420 TAAIHLTKPL HHTAHTHYFI QPTATTMGVP PGMFHYQDQI QLPPR*

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MMLDLNLMVA EEEVVHMAAE KFSKSCGTSN SSIANVTEAD EDSCSRAGET PYFNLSVGRE  60
KMNTIELFPM RMAVGDFGDE GLKKKQMDIS FNQNGSSKVK EVQQLQPLVA RKSRRGPRSR  120
SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHDAAR AYDRAALKFR GVEADINFNP  180
VDYDEDMKKM VNLTKEQFVH ILRRQSTGFA RGSSKYRGVT LHKCWRWEAR MGQFLGKKAY  240
DSAAIECNGR EAFTNFAPIT YGGGTTFERN SLGTIFISLL KENLGLNKSP SNCVVTEGCD  300
QHLNLNLSIS LPSSGYEPTE KQVSVHPHPK YIYHPYSLLD ARKPNVDEPS SGGHSRLSLY  360
PQLLFNAEVQ APNKRNEQNS HFQSFPNWTW KLNGQASPAP MRLLSSAASS GFSSPALSVP  420
TAAIHLTKPL HHTAHTHYFI QPTATTMGVP PGMFHYQDQI QLPPR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.1	2e-76	AP2 family protein