PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0032s0311.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family AP2
Protein Properties Length: 441aa    MW: 49438.7 Da    PI: 9.3089
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0032s0311.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.37.9e-18122171155
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          s+y+GV++++++grW+++I+d      + k+++lg f+ta +Aa+a+++a++k++g
  Kaladp0032s0311.2.p 122 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHDAARAYDRAALKFRG 171
                          78*******************......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MMLDLNLMVA EEEVVHMAAE KFSKSCGTSN SSIANVTEAD EDSCSRAGET PYFNLSVGRE  60
KMNTIELFPM RMAVGDFGDE GLKKKQMDIS FNQNGSSKVK EVQQLQPLVA RKSRRGPRSR  120
SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHDAAR AYDRAALKFR GVEADINFNP  180
VDYDEDMKKM VNLTKEQFVH ILRRQSTGFA RGSSKYRGVT LHKCWRWEAR MGQFLGKKAY  240
DSAAIECNGR EAFTNFAPIT YGGGTTFERN SLGCDQHLNL NLSISLPSSG YEPTEKQVSV  300
HPHPKYIYHP YSLLDARKPN VDEPSSGGHS RLSLYPQLLF NAEVQAPNKR NEQNSHFQSF  360
PNWTWKLNGQ ASPAPMRLLS SAASSGFSSP ALSVPTAAIH LTKPLHHTAH THYFIQPTAT  420
TMGVPPGMFH YQDQIQLPPR *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.11e-74AP2 family protein