PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0032s0361.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 670aa    MW: 73383 Da    PI: 5.3079
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0032s0361.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS274.43.4e-843046673373
                 GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvsel..ykalppsetsekn......sseelaalklf 84 
                          e++++ Ae +s+g+l laq +Larl+++ sp g+p+qR+a yf+e L+  l+ s+++l   +a+++s++ + +       + +l a+k f
  Kaladp0032s0361.1.p 304 EQIFKSAELLSTGNLVLAQGILARLNHQLSPIGKPLQRVAYYFKESLQLLLLLSSNNLdvNSAVTASTALS-SfspplsLILKLGAFKSF 392
                          689999******************************************99887555541144444443332.24677778888899999* PP

                 GRAS  85 sevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel 172
                          se+sP+++f+++t NqaIleave ++r+H+iDfdi++G+QW++++q+La R+  +g  sl+iT+++s  s +  el  ++e L+ fAeel
  Kaladp0032s0361.1.p 393 SEISPVVQFANFTSNQAILEAVEMHDRIHVIDFDIGYGGQWASFMQELALRNssGGVISLKITAFVS--SYDDIELGLIQESLRLFAEEL 480
                          ****************************************************767778*********..5599***************** PP

                 GRAS 173 gvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleale 262
                          +v+++ +++    ++ l+  +  v  gEa+aVnl + + +     ++l+     vL+ +k+lsPk+vv  e+ +d+ + +F++ +++a+e
  Kaladp0032s0361.1.p 481 NVDLDVKIF---GFDLLNSVSHYVGDGEAVAVNLPIGILYNC--GLPLPF----VLRSIKQLSPKIVVTLERGCDRYDLPFAHNVIQAVE 561
                          ********8...999999999999************877665..566666....************************************ PP

                 GRAS 263 yysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve 352
                           y+ l++sl+a    +s+  +k+Er++++++i+ +v ++ +     + t   Wr  + ++ F+p+ ls+++++q ++l++++ ++g+++e
  Kaladp0032s0361.1.p 562 SYANLLESLDAV-NGNSDIVQKLERFMIHPAIERLVLQRFRV----QDTSPPWRTFFISSSFTPLLLSNFNESQGECLVQRTMVHGFHLE 646
                          *********887.68999******************987776....8899**************************************** PP

                 GRAS 353 eesgslvlgWkdrpLvsvSaW 373
                          +++ slvl+W++++L+s++aW
  Kaladp0032s0361.1.p 647 KKRSSLVLCWQQKELISATAW 667
                          ********************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 670 aa     Download sequence    
MPLPFDFQGK PNLQQQHQLL GFFPQDLTAT EQQLQWSHAK AEEAALSGYV GREPTSVLDP  60
RRSPSPPHSS ATLSSSLGSS ASGGAPTPVA SQEPCGGGGR NYNVEFDQSM FGFILNDNSD  120
ARIDDPSGLG KLISAAPVTQ SDLDSLGAIY HHPQHQTGDE FGAFSGNLQE SGFGSGQGSI  180
FGQLGNNIVG NSCIESLFNQ QQQLQHQTTK SLINHHQPSQ SPSLFLPCGF SDQPIFHLPN  240
PKRLNTRPAL DSEQQNQIEK NQFLAQNQLQ MQASMMPASA ACKKMLQSDG TVEEMGLQQQ  300
ALFEQIFKSA ELLSTGNLVL AQGILARLNH QLSPIGKPLQ RVAYYFKESL QLLLLLSSNN  360
LDVNSAVTAS TALSSFSPPL SLILKLGAFK SFSEISPVVQ FANFTSNQAI LEAVEMHDRI  420
HVIDFDIGYG GQWASFMQEL ALRNSSGGVI SLKITAFVSS YDDIELGLIQ ESLRLFAEEL  480
NVDLDVKIFG FDLLNSVSHY VGDGEAVAVN LPIGILYNCG LPLPFVLRSI KQLSPKIVVT  540
LERGCDRYDL PFAHNVIQAV ESYANLLESL DAVNGNSDIV QKLERFMIHP AIERLVLQRF  600
RVQDTSPPWR TFFISSSFTP LLLSNFNESQ GECLVQRTMV HGFHLEKKRS SLVLCWQQKE  660
LISATAWGC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-110GRAS family protein