PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0032s0371.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 218aa    MW: 24099.7 Da    PI: 7.6331
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0032s0371.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY236.94.4e-73211845170
                YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaa.eshldeslkeelleelkveeenlksnvekeesas 93 
                          s s+q+Cyv+Cn C+t+lavsvP ++lfk+vtvrCGhCt+llsvn++      a  ++h   ++ ++ ++ + +ee++++++ +++  + 
  Kaladp0032s0371.1.p  21 SLSDQLCYVHCNLCDTVLAVSVPGSCLFKTVTVRCGHCTNLLSVNMRGLLLPPAPpSHHHAANFFNNPQNFMAMEEMQTNMTLMNQLPNP 110
                          679******************************************999885433303333556667777788888888888888777666 PP

                YABBY  94 tsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                          +++ + +++   + e   vpp++rPPekrqrvPsaynrfikeeiqrika+nPdishreafsaaaknWahfP+ihfgl
  Kaladp0032s0371.1.p 111 NEQMM-MMP--VQTEFLPVPPAVRPPEKRQRVPSAYNRFIKEEIQRIKAENPDISHREAFSAAAKNWAHFPHIHFGL 184
                          65544.433..344555599*******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MSSSSASSFS PDHNILHHPP SLSDQLCYVH CNLCDTVLAV SVPGSCLFKT VTVRCGHCTN  60
LLSVNMRGLL LPPAPPSHHH AANFFNNPQN FMAMEEMQTN MTLMNQLPNP NEQMMMMPVQ  120
TEFLPVPPAV RPPEKRQRVP SAYNRFIKEE IQRIKAENPD ISHREAFSAA AKNWAHFPHI  180
HFGLLPDQPV KRSAANMLQQ KAGAAEGGFL VTDGILQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.14e-64YABBY family protein