PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0032s0389.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 196aa    MW: 21190.1 Da    PI: 6.8755
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0032s0389.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260122.42.4e-38151151100
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 
                          +C aCk+lrrkC+++Cv+apyf ++q +++fa++hk+FGasn +k+l ++p+++r da+ s++yeA ar+rdPvyG+v+ i++lqqq+ +
  Kaladp0032s0389.1.p  15 PCGACKFLRRKCVSGCVFAPYFQSDQgAAHFAAIHKVFGASNASKMLLSIPPQHRLDAVVSMCYEALARVRDPVYGCVAQIFALQQQVLN 104
                          7***********************9989************************************************************** PP

               DUF260  90 lkaelallkee 100
                          l+ae+a ++++
  Kaladp0032s0389.1.p 105 LQAEVACTQAK 115
                          ******99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MSSNWGGGSN TIIGPCGACK FLRRKCVSGC VFAPYFQSDQ GAAHFAAIHK VFGASNASKM  60
LLSIPPQHRL DAVVSMCYEA LARVRDPVYG CVAQIFALQQ QVLNLQAEVA CTQAKLATLR  120
PPQQPYPSDQ SLSGFPSMRC EDALQMQSWS PAELVDQGEV DDGDQEVELQ SLARQLMSRH  180
FSSSGFTFRP PTSSP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00210.12e-55LBD family protein