PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0033s0006.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 805aa    MW: 88240.6 Da    PI: 5.7992
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0033s0006.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox44.62.4e-14563357
                         --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
             Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                         k  ++t+eq+e+Le+++++ ++ps  +r++L   +    +++ +q kvWFqNrR +ek+
  Kaladp0033s0006.1.p  5 KYVRYTPEQVEALERVYAEFPKPSSLKRRQLIGGCpvlsSIEPKQMKVWFQNRRCREKQ 63
                         5678*****************************************************97 PP
2bZIP_124.56e-08571001861
                          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                          rr+R++ ++e  +L+ + k+++aeN++L +e+e+l+k+v+ l  
  Kaladp0033s0006.1.p  57 RRCREKQRKESSRLQAENKKFTAENRMLVEENERLQKQVSHLSY 100
                          9**************************************98865 PP
3START140.71.4e-441503572204
                          HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..E CS
                START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..g 89 
                          +aee+ +e+++ka+  + +W +++ +++g++++ +++ s+++ g a+ra+g+v  +++  v+e+l+d + W ++++   +l v+ ++  g
  Kaladp0033s0006.1.p 150 IAEETQAEFLSKATGIAVNWIQMVGMKPGPDSVEIVAVSRNCAGVAARACGLVSLEPM-KVAEILKDTPAWFRDCRTHNVLTVLPTAngG 238
                          689999****************************************************.8899999999***************99999* PP

                          EEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SS CS
                START  90 alqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgr 175
                          +l+l++++++a++++++ Rdf+ +R+i   ++g++v++++S++  +  ++   s++++Rae++pSg+li+p+++g+s +++v+h dl+  
  Kaladp0033s0006.1.p 239 TLELIYMQTYAPTTMASaRDFWKLRFISPIEDGGLVVCERSLNASTGGSTgpsSPNFIRAEVFPSGFLIRPCEGGGSIIHIVDHLDLDPC 328
                          ********************************************999988888************************************* PP

                          XXHHHHHHHHHHHHHHHHHHHHHHTXXXX CS
                START 176 lphwllrslvksglaegaktwvatlqrqc 204
                          + +++lr+l++s+ + ++k+ +a+l++ +
  Kaladp0033s0006.1.p 329 SAPEILRPLYESSEIIAQKISFAALRHIR 357
                          ************************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 805 aa     Download sequence    
MDSGKYVRYT PEQVEALERV YAEFPKPSSL KRRQLIGGCP VLSSIEPKQM KVWFQNRRCR  60
EKQRKESSRL QAENKKFTAE NRMLVEENER LQKQVSHLSY DNGFMRQKLR SRSATTDASC  120
ESVVTPHSQQ NPTHQPRERD ANSPAGLLAI AEETQAEFLS KATGIAVNWI QMVGMKPGPD  180
SVEIVAVSRN CAGVAARACG LVSLEPMKVA EILKDTPAWF RDCRTHNVLT VLPTANGGTL  240
ELIYMQTYAP TTMASARDFW KLRFISPIED GGLVVCERSL NASTGGSTGP SSPNFIRAEV  300
FPSGFLIRPC EGGGSIIHIV DHLDLDPCSA PEILRPLYES SEIIAQKISF AALRHIRQIA  360
QENCGEIKYG GGKQPAVLRT FSQRLSRGFN DAVNGLVDDG WSLLDSVEMD DVTISINMSA  420
SKFIDSQSNS AALFPAFGGG VLCAKVSMLL EDVAPAHLVR FIREHRSEWA DYGIDAYWAA  480
SVRASPSAIP CSTPSALRSN QVILPLAHTI ELEELCSGIN ENEVGPCAQI VFAPIDESFA  540
DDALLLPSGF RVISLENKAD EPGATRTLDL ASVLEVHTTG ALAAGDSGAN HIKQRAVLTM  600
AFQFTFENHL RDSVASMARQ YVRSVVGAVQ RVAVVLSPAR LGSQMVVENS FPGSTEVITL  660
ARWITQSYKI HTGEELVRVC SQAGDSVLKL LWQFSEAVMC CSLTTNAPPV FTFANQSGLD  720
MLETTFGSLQ DIKLEKTLDE AGRKSLLAEF PKITQQGFAY LPAGNCMSSM GRPISYDQAI  780
AWMVLDDEEV NHCLAFMFVN WSFM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein