PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0033s0028.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 277aa    MW: 31630.6 Da    PI: 8.6435
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0033s0028.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.62.2e-163582148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT++Ed ll+++v ++G ++W+ +a+  g++Rt+k+c++rw++yl
  Kaladp0033s0028.2.p 35 KGPWTEQEDFLLANVVGLFGDRRWDFVAKVSGLNRTGKSCRLRWLNYL 82
                         79********************************************97 PP
2Myb_DNA-binding50.45e-1688133148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg++T  E+ + +++++++G++ W++Iar+++ gRt++++k++w++++
  Kaladp0033s0028.2.p  88 RGKMTSTEERIVLELHARWGNR-WSRIARRLP-GRTDNEIKNYWRTHM 133
                          89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MHHSFGFGRQ VISIIGKNKA KTGEEANMMQ QDTRKGPWTE QEDFLLANVV GLFGDRRWDF  60
VAKVSGLNRT GKSCRLRWLN YLHPGLKRGK MTSTEERIVL ELHARWGNRW SRIARRLPGR  120
TDNEIKNYWR THMRKKAQER KRVNYLSITS SESYSSSSNH TQDSLSCSGK ESFYDTGGLA  180
AIAVTGKKQK EEEGERIKMD EIWNDIDISK DTITPLNDSY NQGLCTYSCA PLVSPIWEYC  240
PDPLWRMDED DSKMPPPSND YFQTCCEAGT STLKGP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.36e-87MYB family protein