PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0033s0056.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 212aa    MW: 22297.1 Da    PI: 8.3247
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0033s0056.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF49.36.2e-163411149
                         HHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
               SRF-TF 11 vtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                         vtfskR+  +lKKA+ L++LC++e a+++fs+ gk++ +
  Kaladp0033s0056.1.p  3 VTFSKRKSNLLKKANVLCTLCGVECAIVVFSPAGKVFSF 41
                         9***********************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MLVTFSKRKS NLLKKANVLC TLCGVECAIV VFSPAGKVFS FGHPSVDQVT DRYLNGILNP  60
TPSPPPPNQV PQNPSEGQHQ AGTDIVQTLS AELSKLTSPL EASKKHGQAL DERRAARMAT  120
NWWERPVADI NNAAQLDALR DAMLNLRGKV YTQAGLRIQA SASSSSVPAA PFAGYNSNPD  180
FTGAGPSTGL LSGGFLGGNY NFGPNEDSPC G*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.13e-32M-type_MADS family protein