PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0033s0075.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 230aa MW: 26374.7 Da PI: 6.5972

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0033s0075.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.2	8e-18	5	50	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd ll+++v+q+G g W++++ g++R++k+c++rw++yl Kaladp0033s0075.1.p 5 AWTEEEDHLLKKCVEQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYL 50 7*******************************************97 PP
2	Myb_DNA-binding	52.1	1.5e-16	56	100	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +T eE +l++++++ lG++ W++Ia++++ gRt++++k++w+ + Kaladp0033s0075.1.p 56 RGTFTDEEVLLIIKLHNNLGNR-WSLIASRLP-GRTANDVKNYWNCH 100 899*****************.*****.*********977 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MGGVAWTEEE DHLLKKCVEQ YGEGKWHRVP LLAGLNRCRK SCRLRWLNYL RPNIRRGTFT 60 DEEVLLIIKL HNNLGNRWSL IASRLPGRTA NDVKNYWNCH LSKKLNKVHN KDDPTISPVT 120 TSNQQVGRFT AHHQFQTLTS ISGSSSTGPH EEQTSMIHLE DMYSLELKQV GSNWKQIVCG 180 GEEEDGQNEV NKFAPEFEYE DTKIKAGGEI RSMDNNWGCW EDLIFDMDL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	7e-52	MYB family protein