PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0033s0140.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 227aa    MW: 25651.1 Da    PI: 8.8264
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0033s0140.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY216.86.8e-67202083170
                YABBY   3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas.qllaaeshldeslkee....................l 71 
                          + sss+q+Cyv+CnfC+t+lavsvPs slfk+vtvrCGhC++llsvn+       +++++h  + ++++                     
  Kaladp0033s0140.1.p  20 HSSSSHQLCYVHCNFCDTVLAVSVPSCSLFKTVTVRCGHCSNLLSVNMGALLvPPQPSSNHQYHPIHNPppslhqeelyvvntvmnnsaA 109
                          57899****************************************999876634566777655555554799999999888887766663 PP

                YABBY  72 leelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWa 161
                          +e ++ +e++ + + ++ + ++ ++  e+l++ ++++++    +++PPekrqrvPs ynrfi+eeiqrika+nPdi+hr+afsaaaknWa
  Kaladp0033s0140.1.p 110 AESEQEREQEHHRKPTMMQIQQPKRVDEMLNTFSKQKTSLFASINKPPEKRQRVPSVYNRFIREEIQRIKAGNPDITHRQAFSAAAKNWA 199
                          3333333333333333333344444445668888888888899*********************************************** PP

                YABBY 162 hfPkihfgl 170
                          +fP+ihfgl
  Kaladp0033s0140.1.p 200 YFPHIHFGL 208
                          *******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MSSSSTSSFS PPDHHQTLVH SSSSHQLCYV HCNFCDTVLA VSVPSCSLFK TVTVRCGHCS  60
NLLSVNMGAL LVPPQPSSNH QYHPIHNPPP SLHQEELYVV NTVMNNSAAA ESEQEREQEH  120
HRKPTMMQIQ QPKRVDEMLN TFSKQKTSLF ASINKPPEKR QRVPSVYNRF IREEIQRIKA  180
GNPDITHRQA FSAAAKNWAY FPHIHFGLMP EELHQPVTKK PNLLSR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00180.11e-58YABBY family protein