PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0033s0140.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 161aa    MW: 18570.1 Da    PI: 10.1569
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0033s0140.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY1272.6e-394514271170
                YABBY  71 lleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknW 160
                            e+++ +e++ k ++++ +  + ++  e+l++ ++++++    +++PPekrqrvPs ynrfi+eeiqrika+nPdi+hr+afsaaaknW
  Kaladp0033s0140.2.p  45 ESEQEREQEHHRKPTMMQIQ--QPKRVDEMLNTFSKQKTSLFASINKPPEKRQRVPSVYNRFIREEIQRIKAGNPDITHRQAFSAAAKNW 132
                          22333333333333333333..3334445677888888888889********************************************** PP

                YABBY 161 ahfPkihfgl 170
                          a+fP+ihfgl
  Kaladp0033s0140.2.p 133 AYFPHIHFGL 142
                          ********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MGALLVPPQP SSNHQYHPIH NPPPSLHQEE LYVVNTVMNN SAAAESEQER EQEHHRKPTM  60
MQIQQPKRVD EMLNTFSKQK TSLFASINKP PEKRQRVPSV YNRFIREEIQ RIKAGNPDIT  120
HRQAFSAAAK NWAYFPHIHF GLMPEELHQP VTKKPNLLSR *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.12e-35YABBY family protein