PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0033s0140.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 156aa    MW: 17878.3 Da    PI: 10.6158
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0033s0140.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY132.17.3e-41813737170
                YABBY  37 vrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekrqrvP 126
                          v C h  s  s +    +  ++++s+ + +++ +  e+++ +e++ k ++++ +++++  +  +l++ ++++++    +++PPekrqrvP
  Kaladp0033s0140.3.p   8 VVCQHGRSSCSSTAI-IKSSVSSHSQ-SSAFTSPESEQEREQEHHRKPTMMQIQQPKRVDE--MLNTFSKQKTSLFASINKPPEKRQRVP 93 
                          556665555552222.2223333333.3345555555556666666666665555554444..577777777787889************ PP

                YABBY 127 saynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                          s ynrfi+eeiqrika+nPdi+hr+afsaaaknWa+fP+ihfgl
  Kaladp0033s0140.3.p  94 SVYNRFIREEIQRIKAGNPDITHRQAFSAAAKNWAYFPHIHFGL 137
                          ******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MWPLLQSVVC QHGRSSCSST AIIKSSVSSH SQSSAFTSPE SEQEREQEHH RKPTMMQIQQ  60
PKRVDEMLNT FSKQKTSLFA SINKPPEKRQ RVPSVYNRFI REEIQRIKAG NPDITHRQAF  120
SAAAKNWAYF PHIHFGLMPE ELHQPVTKKP NLLSR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.12e-35YABBY family protein