PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0033s0238.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 229aa    MW: 26389.2 Da    PI: 9.7287
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0033s0238.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.32.8e-1321106899
                          -HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                   B3   8 sdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                           d l  ++l++p +f+ ++ +g+   +   tl + s   We  +  ++  +++++++GW++F +++ L   + ++F+++g++ f  +v+v
  Kaladp0033s0238.1.p  21 RDDLHAKNLRVPPQFM-KYlSGD--LTDHATLITHSTACWEAAI--SRAEETIYFKGGWENFFEDHSLGHDELLMFTYKGNMHF--HVRV 103
                          45555566********.555666..44579999***********..**********************************9*99..9999 PP

                          E-S CS
                   B3  97 frk 99 
                          f +
  Kaladp0033s0238.1.p 104 FGR 106
                          876 PP
2B347.92.5e-151502271898
                          --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                   B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                          lp + ++++ ++++++ t  ++   gr+W+vk+  ++  g++ ++kGW++Fv++n+Lk gD++ F+  +  + el+v+vfr
  Kaladp0033s0238.1.p 150 LPIPTTANMILNPPREATNFVMRCGGRVWDVKC-LQNAAGKHRFSKGWRNFVRDNELKPGDTCAFE--QVATYELRVTVFR 227
                          566666566677778888899999*********.7899999*************************..4478888999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MATRSRSVNS GKEKSFIAIM RDDLHAKNLR VPPQFMKYLS GDLTDHATLI THSTACWEAA  60
ISRAEETIYF KGGWENFFED HSLGHDELLM FTYKGNMHFH VRVFGRDRCL RTQNARPQIQ  120
RQLPGESFTS SFPHFKICLR KSSFQPFYLL PIPTTANMIL NPPREATNFV MRCGGRVWDV  180
KCLQNAAGKH RFSKGWRNFV RDNELKPGDT CAFEQVATYE LRVTVFRC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.11e-12B3 family protein