PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0033s0304.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 736aa MW: 79812 Da PI: 5.9272

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0033s0304.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101	6.9e-32	313	370	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsY+rCt+ +Cpvkkkvers+ ++ v+ei+Y+g Hnh+k Kaladp0033s0304.1.p 313 EDGYNWRKYGQKQVKGSEYPRSYFRCTHMNCPVKKKVERSH-EGIVTEIIYKGAHNHPK 370 8**************************************.9************85 PP
2	WRKY	103.7	9.9e-33	525	583	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ Kaladp0033s0304.1.p 525 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHDLKSVITTYEGKHNHD 583 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 736 aa Download sequence
MDEHAAAMMG DWVPPSPSPK AFFSSLLGGD EQISTGPMPQ IPDEARNGGC SSFGSYQGGM 60 GFEDDNAKQR GISFENDLIF SPLPDHNKPT SRGGLVDRIA ARAGFNAPRL NTESIILTDR 120 SSTGEVKSPY FTIPTGISPT ALLESPVFLS NPLTQASPTT GKFPLFAFEN NISSMVAENA 180 QSKEDFFDDV DGSSFAFKPP AESGLSFSLG STDKMNQLMN PQALPKIEVS VRSENFFRNS 240 EPSLIHSHEG GFSRSLTEKD LGEITAGSDI KGLDTISGTA EHSPPQGDQH DDEGDQRISS 300 DSYAGGSAGS LAEDGYNWRK YGQKQVKGSE YPRSYFRCTH MNCPVKKKVE RSHEGIVTEI 360 IYKGAHNHPK PAPNHRSSIG SNQLDDTRDQ VGLENGGDRD SVWGTAQNGL LPVTHEWRND 420 SFEHKSLSSM NSELRNPSSS LQMQNGAVVE SGDVVDPSST CSNDEEEDDR VTHGSVSIAN 480 DGEGDESESK RRKIETYAAE IGGGATRAIR EPRVVVQTTS DVDILDDGYR WRKYGQKVVK 540 GNPNPRSYYK CTSAGCSVRK HVERASHDLK SVITTYEGKH NHDVPAARNS SHVSSAASAN 600 GGMGSQSQSL IPRHEPSQVT SMARYERQPH LSSFNLPMMQ SLGAPPHGFP TGVIQSSLAN 660 MSMAGLGPGQ NKFPGIPAYP YLMQQQQLQQ RHVNDLSFMM PKGEAKVEPN SDPNVYHPNG 720 SSVYNRIVNR LPLGP*

Sequence ? help Back to Top

Protein Sequence Length: 736 aa Download sequence

MDEHAAAMMG DWVPPSPSPK AFFSSLLGGD EQISTGPMPQ IPDEARNGGC SSFGSYQGGM  60
GFEDDNAKQR GISFENDLIF SPLPDHNKPT SRGGLVDRIA ARAGFNAPRL NTESIILTDR  120
SSTGEVKSPY FTIPTGISPT ALLESPVFLS NPLTQASPTT GKFPLFAFEN NISSMVAENA  180
QSKEDFFDDV DGSSFAFKPP AESGLSFSLG STDKMNQLMN PQALPKIEVS VRSENFFRNS  240
EPSLIHSHEG GFSRSLTEKD LGEITAGSDI KGLDTISGTA EHSPPQGDQH DDEGDQRISS  300
DSYAGGSAGS LAEDGYNWRK YGQKQVKGSE YPRSYFRCTH MNCPVKKKVE RSHEGIVTEI  360
IYKGAHNHPK PAPNHRSSIG SNQLDDTRDQ VGLENGGDRD SVWGTAQNGL LPVTHEWRND  420
SFEHKSLSSM NSELRNPSSS LQMQNGAVVE SGDVVDPSST CSNDEEEDDR VTHGSVSIAN  480
DGEGDESESK RRKIETYAAE IGGGATRAIR EPRVVVQTTS DVDILDDGYR WRKYGQKVVK  540
GNPNPRSYYK CTSAGCSVRK HVERASHDLK SVITTYEGKH NHDVPAARNS SHVSSAASAN  600
GGMGSQSQSL IPRHEPSQVT SMARYERQPH LSSFNLPMMQ SLGAPPHGFP TGVIQSSLAN  660
MSMAGLGPGQ NKFPGIPAYP YLMQQQQLQQ RHVNDLSFMM PKGEAKVEPN SDPNVYHPNG  720
SSVYNRIVNR LPLGP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-158	WRKY family protein