PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0034s0004.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 231aa    MW: 26409 Da    PI: 9.9023
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0034s0004.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.33.1e-1973125456
                          -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          ++++t+eq+  Le  F +++++  e++e+LA+klgL++rqV +WFqNrRa++k
  Kaladp0034s0004.1.p  73 KRKLTEEQVSLLEVNFGNEHKLEWERKERLAAKLGLDQRQVAIWFQNRRARWK 125
                          4589************************************************9 PP
2HD-ZIP_I/II110.71e-3572161291
          HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                          +kr+l++eqv+lLE +F +e+kLe erK++la +Lgl++rqva+WFqnrRAR+ktk+lE+dy++Lk+a+d+l+ +n +Le++v +L e+l
  Kaladp0034s0004.1.p  72 RKRKLTEEQVSLLEVNFGNEHKLEWERKERLAAKLGLDQRQVAIWFQNRRARWKTKKLEEDYSRLKAAHDNLVLHNFQLESQVIKLVERL 161
                          8*************************************************************************************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MISVINNNKS EAGDDQMLSI SQMYPAAGVV YAQLETEIKQ EAAGDKKMRK RRRKKSKACR  60
GGESIREAGA LRKRKLTEEQ VSLLEVNFGN EHKLEWERKE RLAAKLGLDQ RQVAIWFQNR  120
RARWKTKKLE EDYSRLKAAH DNLVLHNFQL ESQVIKLVER LGRTENQAKR LSERSSEGTS  180
SNRPTSCLSL DAPFLGGFGI IQDGLHNNVF YMDQENYVPG AMEWPSMHDM *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14654KKMRKRRRK
24953RKRRR
34955RKRRRKK
44975RKRRRKKSKACRGGESIREAGALRKRK
55076RKRRRKKSKACRGGESIREAGALRKRK
65177RKRRRKKSKACRGGESIREAGALRKRK
75278RKRRRKKSKACRGGESIREAGALRKRK
85379RKRRRKKSKACRGGESIREAGALRKRK
97176LRKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36740.11e-51HD-ZIP family protein