PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0035s0004.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 505aa MW: 55138.4 Da PI: 6.849

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0035s0004.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	110.2	2.3e-34	56	202	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk........lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra 77 lp+G++F+Ptd+el+ e+L++kve+ + + + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ Kaladp0035s0004.2.p 56 LPAGVKFDPTDQELI-EHLEAKVESINghikshplI---DefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRK 140 799**********.99**998665554442...144434766646******.555666799**************8 PP NAM 78 ..........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++vl+ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l Kaladp0035s0004.2.p 141 iqteccdpqaGGETRWHKTGKTRPVLA-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 202 566666665433778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MNKQQLSGEG GVGSSSSMIS SSDLLDAKLE GQQLCGSKHC PGCGHKLDGK PDWLGLPAGV 60 KFDPTDQELI EHLEAKVESI NGHIKSHPLI DEFIPTIEGE DGICYTHPEK LPGVTRDGLS 120 RHFFHRPSKA YTTGTRKRRK IQTECCDPQA GGETRWHKTG KTRPVLANGK QKGCKKILVL 180 YTNFGKNRKP EKTNWVMHQY HLGQHEEEKE GELVVSKIFY QTQPRQCNWV DRTSSVVPVA 240 DGSTTTGVDA AGRRDSGSCS SSKDINVQVI MAPQHQLVDG DQLRDRQVSA AMAAALSSYG 300 AMDMQQHLKT DPLFTGFVPF RKVCDEVGLG EVATSTTTAG DQVQASTSGT CQEHDLVGQQ 360 PHLHHLHHHL SHQQHPQLNA AFHISRPSPP ISTIISPPPP PLHTRATSIL LNHQDPYHSV 420 AGMMMQNESN YHEQQGMRSS ASSLEELIMV CSSNNSGGGA SGAGPGGDIK AESSMSNPQE 480 AEWLKYSSFW SDPDDHHHNN HHDG*

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MNKQQLSGEG GVGSSSSMIS SSDLLDAKLE GQQLCGSKHC PGCGHKLDGK PDWLGLPAGV  60
KFDPTDQELI EHLEAKVESI NGHIKSHPLI DEFIPTIEGE DGICYTHPEK LPGVTRDGLS  120
RHFFHRPSKA YTTGTRKRRK IQTECCDPQA GGETRWHKTG KTRPVLANGK QKGCKKILVL  180
YTNFGKNRKP EKTNWVMHQY HLGQHEEEKE GELVVSKIFY QTQPRQCNWV DRTSSVVPVA  240
DGSTTTGVDA AGRRDSGSCS SSKDINVQVI MAPQHQLVDG DQLRDRQVSA AMAAALSSYG  300
AMDMQQHLKT DPLFTGFVPF RKVCDEVGLG EVATSTTTAG DQVQASTSGT CQEHDLVGQQ  360
PHLHHLHHHL SHQQHPQLNA AFHISRPSPP ISTIISPPPP PLHTRATSIL LNHQDPYHSV  420
AGMMMQNESN YHEQQGMRSS ASSLEELIMV CSSNNSGGGA SGAGPGGDIK AESSMSNPQE  480
AEWLKYSSFW SDPDDHHHNN HHDG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-132	NAC family protein