PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0035s0079.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 162aa    MW: 19006.6 Da    PI: 9.0377
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0035s0079.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.37.5e-5461331128
                  NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                          lppGfrFhPtd+elv++yLk+k+++ ++el ++i+evd+yk+ePwdL  k  + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgk
  Kaladp0035s0079.1.p   6 LPPGFRFHPTDQELVDCYLKRKIHRLEIEL-DIIPEVDLYKCEPWDLAdKsFLPGRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGK 94 
                          79****************************.99**************84334555778******************************** PP

                  NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                          d++v+s +++ +g+kktLv+y+grap+g +t Wvmheyrl
  Kaladp0035s0079.1.p  95 DRRVMS-HSRPIGMKKTLVYYRGRAPHGIRTGWVMHEYRL 133
                          ******.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MSPVGLPPGF RFHPTDQELV DCYLKRKIHR LEIELDIIPE VDLYKCEPWD LADKSFLPGR  60
DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVMS HSRPIGMKKT LVYYRGRAPH  120
GIRTGWVMHE YRLDENECED SSGIQVPTTF PAYYDNALFR T*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.19e-92NAC family protein