PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0036s0051.5.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 231aa    MW: 26486.3 Da    PI: 9.5951
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0036s0051.5.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.52e-29959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krien + rqvtf+kRrng++KKA+ELSvLCdaeva+++fs++g+lyeys+
  Kaladp0036s0051.5.p  9 KRIENVTSRQVTFCKRRNGLMKKAYELSVLCDAEVALMVFSTRGRLYEYSN 59
                         79***********************************************95 PP
2K-box106.63e-35791745100
                K-box   5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 
                          +  +++ ++ + +qqe+akL+++i+++q+++R+l+Ge+L+sL++keL+qLe++Le+++++iRskK+e+ll++ie lqk+e el++e+ +L
  Kaladp0036s0051.5.p  79 TAANTTVTNVQFYQQESAKLRQQIHMIQNTNRNLMGESLGSLNVKELKQLENRLERGVTRIRSKKHEMLLAEIEFLQKREIELENETICL 168
                          455578899********************************************************************************* PP

                K-box  95 rkklee 100
                          r+k++e
  Kaladp0036s0051.5.p 169 RAKVAE 174
                          ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MGRGKIEIKR IENVTSRQVT FCKRRNGLMK KAYELSVLCD AEVALMVFST RGRLYEYSNN  60
NSIKSTIERY KKACSDSTTA ANTTVTNVQF YQQESAKLRQ QIHMIQNTNR NLMGESLGSL  120
NVKELKQLEN RLERGVTRIR SKKHEMLLAE IEFLQKREIE LENETICLRA KVAEVERLQQ  180
ANMEAANQEL NTIQAYVARN FFQHDLLQGA DNASQVNHFA LPDDKILRLG *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09960.11e-107MIKC_MADS family protein