PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0036s0130.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family AP2
Protein Properties Length: 419aa    MW: 47026 Da    PI: 8.6573
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0036s0130.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.91.8e-1685143255
                  AP2   2 gykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                           ++GV++++++gr++A+++d  ++n+   k+ k+++lg +g +e Aa a++ a++k++g
  Kaladp0036s0130.1.p  85 TFRGVTRHRWTGRYEAHLWDkNCWNQsqnKKgKQVYLGAYGDEEAAAHAYDLAALKYWG 143
                          69******************999977766447*************************98 PP
2AP251.91.9e-16186237155
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          s+y+GV +++ +grW+A+I  +     +k+ +lg+f t eeAa+a++ a+ +++g
  Kaladp0036s0130.1.p 186 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTFATQEEAAEAYDMAAIEYRG 237
                          89****99**********988422...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MPKVPHPDQN QITRTNKDQM ESHNKKKKSE IKKDSADAIC TDKKLINIAA ALKVDAAVTN  60
KKKKQQPRRS RKAVPRDAPP QRTSTFRGVT RHRWTGRYEA HLWDKNCWNQ SQNKKGKQVY  120
LGAYGDEEAA AHAYDLAALK YWGPQSILNF PLSTYEEELK GMEDQSREEY IGSLRRKSSG  180
FSRGVSKYRG VARHHHNGRW EARIGRVLGN KYLYLGTFAT QEEAAEAYDM AAIEYRGLNA  240
VTNFDLSRYA KWLSCSHQEP NAHKSDSNLM SHNQLGHHQA ADSSLFTFPA ASLSENYTSE  300
DADEAAPIRH DRLTAAASLS VFNDLLGRRT QNSKEEFYPS YSNTTTTSAA ATLSSGEDSD  360
SKSSSALTNK RFFPDDIQTI FGTTDFIHIG SEDMIFGEAE LSSYTSSLFD LDHGFLNQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12564KKKKSEIKKDSADAICTDKKLINIAAALKVDAAVTNKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.12e-92AP2 family protein