PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0036s0130.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 416aa MW: 46650.6 Da PI: 8.6654

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0036s0130.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	40.1	9.3e-13	85	140	2	55
AP2 2 gykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 ++GV++++++gr++A+++d ++n+ ++k+ g +g +e Aa a++ a++k++g Kaladp0036s0130.2.p 85 TFRGVTRHRWTGRYEAHLWDkNCWNQsQNKKGKQGAYGDEEAAAHAYDLAALKYWG 140 69****************99999998855555******************98 PP
2	AP2	51.9	1.8e-16	183	234	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + +k+ +lg+f t eeAa+a++ a+ +++g Kaladp0036s0130.2.p 183 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTFATQEEAAEAYDMAAIEYRG 234 89**99******988422...5***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MPKVPHPDQN QITRTNKDQM ESHNKKKKSE IKKDSADAIC TDKKLINIAA ALKVDAAVTN 60 KKKKQQPRRS RKAVPRDAPP QRTSTFRGVT RHRWTGRYEA HLWDKNCWNQ SQNKKGKQGA 120 YGDEEAAAHA YDLAALKYWG PQSILNFPLS TYEEELKGME DQSREEYIGS LRRKSSGFSR 180 GVSKYRGVAR HHHNGRWEAR IGRVLGNKYL YLGTFATQEE AAEAYDMAAI EYRGLNAVTN 240 FDLSRYAKWL SCSHQEPNAH KSDSNLMSHN QLGHHQAADS SLFTFPAASL SENYTSEDAD 300 EAAPIRHDRL TAAASLSVFN DLLGRRTQNS KEEFYPSYSN TTTTSAAATL SSGEDSDSKS 360 SSALTNKRFF PDDIQTIFGT TDFIHIGSED MIFGEAELSS YTSSLFDLDH GFLNQ*

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MPKVPHPDQN QITRTNKDQM ESHNKKKKSE IKKDSADAIC TDKKLINIAA ALKVDAAVTN  60
KKKKQQPRRS RKAVPRDAPP QRTSTFRGVT RHRWTGRYEA HLWDKNCWNQ SQNKKGKQGA  120
YGDEEAAAHA YDLAALKYWG PQSILNFPLS TYEEELKGME DQSREEYIGS LRRKSSGFSR  180
GVSKYRGVAR HHHNGRWEAR IGRVLGNKYL YLGTFATQEE AAEAYDMAAI EYRGLNAVTN  240
FDLSRYAKWL SCSHQEPNAH KSDSNLMSHN QLGHHQAADS SLFTFPAASL SENYTSEDAD  300
EAAPIRHDRL TAAASLSVFN DLLGRRTQNS KEEFYPSYSN TTTTSAAATL SSGEDSDSKS  360
SSALTNKRFF PDDIQTIFGT TDFIHIGSED MIFGEAELSS YTSSLFDLDH GFLNQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	25	64	KKKKSEIKKDSADAICTDKKLINIAAALKVDAAVTNKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	7e-88	AP2 family protein