PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0036s0186.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 428aa    MW: 47335 Da    PI: 8.6903
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0036s0186.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.65e-065880123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         y+C++C++ F r  nL+ H r+H
  Kaladp0036s0186.1.p 58 YVCEICNQGFQRDQNLQMHRRRH 80
                         9*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    
MLDHQASSNN NTARTASTSS FQNGLSSSKR KRRPAGTPDP DAEVVALSPK TLLESDRYVC  60
EICNQGFQRD QNLQMHRRRH KVPWKLVRRD DNGSGNDGGG NQEARKRVYV CPEPSCLHHD  120
ASHALGDLVG IKKHFRRKHS NYKQWVCDKC CKGYAVQSDY KAHLKTCGTR GHSCDCGRVF  180
SRVESFIEHQ DACTIKRVDP PQHQRLPTAF QPACSSSTSP SGCGETASLA MSHFQRVMKQ  240
IPKVIQHQEP LSQHSNHPQQ HNLHELQLLP SSSNTTTALY DDKNETALLK LSMGISRGGQ  300
PRGEEEATIM RVAVAEKEYA EEVRRRSKRE LELAELEFEN AKRMRQQALG ELERAKALRD  360
QAVKKISSTM MQITCQACQQ QFQASANAAA TPPLLPIMSE ESSHAVSFIS SAVSEGDGGD  420
GGGGGHR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12934KRKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68130.11e-115C2H2 family protein