PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0036s0300.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 521aa MW: 57136.5 Da PI: 7.6426

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0036s0300.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.8	4.4e-33	196	252	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgse+prsYY+Ct++gCp+kkkvers d++++ei+Y+g+Hnh Kaladp0036s0300.1.p 196 DDGYNWRKYGQKQVKGSENPRSYYKCTFPGCPTKKKVERSL-DGDITEIVYKGSHNHA 252 8**************************************.*************7 PP
2	WRKY	105.7	2.4e-33	365	423	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++d ++v++tYeg+Hnh+ Kaladp0036s0300.1.p 365 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHD 423 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
MAASSANSPF SLSPSFMNNS FSDLLNSPSA VAPGDDSTLL NGSVNRGAPK FKSLHPPSLL 60 PVSPTPASPS SYFAFPPGLS PSELLDSPVL LTSSYLLPSP TTGSFPAAQP HNWRSLSVSG 120 QHDVKPEDSR NQNNTSSYSD FTFQPELRTV SQQPWNFKSY QSQQKTDSIS NERVSGDYSS 180 YQPAPIQSVR EARRSDDGYN WRKYGQKQVK GSENPRSYYK CTFPGCPTKK KVERSLDGDI 240 TEIVYKGSHN HAKPQSTRRS ASNGSHPMQH VNGELQAQEH SVGSQMVANQ LSDHSAATPE 300 NSSVSVGDDD RSSSRRVGDD KLDDDEPDPK RWKRENEGEI MSAPGCRAVR EPRVVVQTTS 360 DIDILDDGYR WRKYGQKVVK GNPNPRSYYK CTNPGCPVRK HVERASHDLR AVITTYEGKH 420 NHDVPAARGS GSHSRQAAAN NSCVTNSTHH QSSTGQPAAA QQAPFTLEML HGPESFGFGN 480 PVSAYNNVNG RQQNPDCSVF PRTKEEPRED QFLESICYAD *

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

MAASSANSPF SLSPSFMNNS FSDLLNSPSA VAPGDDSTLL NGSVNRGAPK FKSLHPPSLL  60
PVSPTPASPS SYFAFPPGLS PSELLDSPVL LTSSYLLPSP TTGSFPAAQP HNWRSLSVSG  120
QHDVKPEDSR NQNNTSSYSD FTFQPELRTV SQQPWNFKSY QSQQKTDSIS NERVSGDYSS  180
YQPAPIQSVR EARRSDDGYN WRKYGQKQVK GSENPRSYYK CTFPGCPTKK KVERSLDGDI  240
TEIVYKGSHN HAKPQSTRRS ASNGSHPMQH VNGELQAQEH SVGSQMVANQ LSDHSAATPE  300
NSSVSVGDDD RSSSRRVGDD KLDDDEPDPK RWKRENEGEI MSAPGCRAVR EPRVVVQTTS  360
DIDILDDGYR WRKYGQKVVK GNPNPRSYYK CTNPGCPVRK HVERASHDLR AVITTYEGKH  420
NHDVPAARGS GSHSRQAAAN NSCVTNSTHH QSSTGQPAAA QQAPFTLEML HGPESFGFGN  480
PVSAYNNVNG RQQNPDCSVF PRTKEEPRED QFLESICYAD *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-100	WRKY family protein