PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0061.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family AP2
Protein Properties Length: 370aa    MW: 40353 Da    PI: 7.0079
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0061.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.81.5e-14106155355
                  AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          y+GV+++++ grW A+I  +     ++  +lg+f t eeAa+a++ a+ k++g
  Kaladp0037s0061.1.p 106 YRGVTRHHQHGRWQARIGRVAG---NRDLYLGTFSTQEEAAEAYDIAAIKFRG 155
                          9***************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MFLMRCLFVV CGRGRVGGGT WRLMLEIAHI DDCGLPVYLG GYEKEDKAAQ AYDLAALKYW  60
GPTTSTNFPI GNYEKELEEM KNMTKQEFVA SLRRRSSGFS RGASMYRGVT RHHQHGRWQA  120
RIGRVAGNRD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDMSRYDVK SIASSNLPIG  180
GIGNKPRTSS ESISEGRSDN DHDISECSVS FVPLDQQPQP IYSNLNFALP VKADPTSNYW  240
PALLGYGNNQ ITLATPSPNS NNNLINNYFH SNNSAAAGPH YSNNMNIYYA ADGLSLAGSE  300
PGSVETRSVI PYATPISMTM TNSSGVVGTH ENVSSSGNGI SNWVAPNPHQ YQTGKPSLSV  360
FQTPIFGIE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.12e-85AP2 family protein