PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0167.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-X1
Protein Properties Length: 865aa    MW: 97004 Da    PI: 8.4795
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0167.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X118.15.8e-06185203120
             zf-NF-X1   1 CGkHkCqklCHeGpCppCpq 20 
                          CG H+C  lCH+GpCp+Cp+
  Kaladp0037s0167.1.p 185 CG-HRCLLLCHPGPCPSCPK 203
                          **.***************96 PP
2zf-NF-X120.41.1e-06240256420
             zf-NF-X1   4 HkCqklCHeGpCppCpq 20 
                          H+C ++CHeGpCppC++
  Kaladp0037s0167.1.p 240 HRCAEICHEGPCPPCKE 256
                          ***************96 PP
3zf-NF-X118.54.3e-06290309120
             zf-NF-X1   1 CGkHkCqklCHeGpCppCpq 20 
                          CGkHkC+k CH G+C++Cp+
  Kaladp0037s0167.1.p 290 CGKHKCSKGCHSGDCGKCPL 309
                          ******************95 PP
4zf-NF-X117.21.1e-05397416120
             zf-NF-X1   1 CGkHkCqklCHeGpCppCpq 20 
                          CG+H C + C+ G+CppC++
  Kaladp0037s0167.1.p 397 CGRHACRRRCCDGDCPPCSE 416
                          ******************85 PP
5zf-NF-X117.49.7e-06418442119
             zf-NF-X1   1 CG......kHkCqklCHeGpCppCp 19 
                          CG      +HkC ++CH+GpC pCp
  Kaladp0037s0167.1.p 418 CGkrlrckNHKCPSPCHRGPCAPCP 442
                          777777779***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 865 aa     Download sequence    
MISSTTERRR FASDSDSDSD AGNSPTNSQS LSHTDLSTSI FKSYIELSGN SSPDLSKIQS  60
FLTSSRSGAL SCLICLERIR ISDPTWSCSS RCFAVFHLVC IQSWARQSLD LAAARAATRL  120
SADLFPNAAA NFVWNCPKCR VEYSKTLIPK SYFCFCGKVQ DPPSDPWILP HSCGEVCDRP  180
LPRNCGHRCL LLCHPGPCPS CPKLVNARCF CSASEKVVRC GFKEFSCNKR CSKLLDCRAH  240
RCAEICHEGP CPPCKERAFY KCQCGKTNEE KECCDRHFQC QIPCEKMLGC GKHKCSKGCH  300
SGDCGKCPLQ GRRTCPCGKK VYEGMSCDVS VPLCGSTCEK LLACGFHKCP ERCHRGPCIE  360
TCRTVVLKSC RCGGLRKEIP CFQDLACERK CNKVRDCGRH ACRRRCCDGD CPPCSEVCGK  420
RLRCKNHKCP SPCHRGPCAP CPIMVSISCA CGETRFEVPC GTEMEQKPPR CRKLCHIAPL  480
CRHSTILKPH KCHYGACPSC RLICEEDYPC GHLCKLRCHG PKPPPNLEFT LKPKKKKSNY  540
VQESIPGTPC PPCPELVWRS CVGQHLGAER MMVCSDRTQF SCDNLCGNPL RCGNHYCTKT  600
CHALKTSQQL GESCEECRLS CQKERSPKCS HSCPRSCHPG DCPPCKVLIK RSCHCGSMVH  660
VFECMYYNSL SEEEQINVRS CHGPCHRKLP YCTHLCPVTC HPGQCPQPDK CSKKVTVRCK  720
CLSVKKEWLC QEVQAAYHKA GSNPEDIPKT QFGVGLLSCN SVCKSKIQVV ESELQMHKPR  780
QMEVKELAAE NIQPKRRKRR ERVQGTKEDN RFQRVIATVK KLFFFITLFF VLIATGYYGY  840
KGLLKLSDWM NEIEEQRLRR PPRF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1794800PKRRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05660.10.0NF-X1 family protein