PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0267.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family AP2
Protein Properties Length: 568aa    MW: 61031.7 Da    PI: 6.9041
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0267.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2331.5e-10171227155
                  AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          s y+GV++++++gr++A+++d  +     ++ k  + g ++ +++Aa+a++ a++k++g
  Kaladp0037s0267.1.p 171 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEDKAARAYDMAALKYWG 227
                          57*******************5444.2455535555.7799999*************98 PP
2AP2476.3e-15272321355
                  AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  Kaladp0037s0267.1.p 272 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 321
                          9***************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 568 aa     Download sequence    
MSSHTSQEGH HFSLGLINHN LDTSFQTHEW NLMDTQHGES DCPKVVADFM GVGKSSSHHH  60
SDLTTYNQLH HQATSTEPDY LYLNNTSLYG IQNAVPLSTV TANSSFEYQD NANSLESLTL  120
SMGSNNSSKR STCETSTVGE NSNANSTATA AIVEAAPAAR RTLDSFGQRT SIYRGVTRHR  180
WTGRYEAHLW DNSCRREGQS RKGRQGGYDK EDKAARAYDM AALKYWGTST TTNFPISNYE  240
KELEDMKNMT RQEFVASIRR KSSGFSRGAS MYRGVTRHHQ HGRWQARIGR VAGNKDLYLG  300
TFSTEEEAAE AYDIAAIKFR GLNAVTNFDM NRYDVKSILE SNTLPIGGGA AKRLKEAQAI  360
ETSRKREEML ALGCSSSTFH YNPSGVGRLA PAAASSYPLM HHYQFEHSGN NLLGLQNQDV  420
LSHQLAQDSG SYSYLQTQLQ LQQQGAQGGS YPHLYNGYLH SNPGFIHGLI GMGGGGSTGG  480
SLSLDHSNNV GYNLGNNVGS SGGGGGLGLG SDVGAGSGQL DLGMVKVDYD MAAQGGGGGG  540
YGGGGWNAEG AGASNGNNGG VFAMWND*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.11e-166AP2 family protein