PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0289.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 454aa    MW: 50802.6 Da    PI: 6.5101
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0289.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS455.14.3e-139474501374
                 GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90 
                          l++lLl+cA++v++g+le a+ +L ++s++aspdgd+mqR+a+yft ALa+r+++s+++ly+al++ +       ee+ ++klf e++P+
  Kaladp0037s0289.1.p  47 LIHLLLTCANHVANGSLESANVALDQISQIASPDGDTMQRIASYFTDALANRILKSWPGLYRALNSARML--MAHEEILVQKLFLELFPF 134
                          689*************************************************************888886..59999************* PP

                 GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
                          lk+ + +aNqaI+ea+ege+++H+iD+   +++QW+aLlqaL+ Rpegpp+lRiTg+++    +k  l ++++rL+  Ae+l++pf+fn+
  Kaladp0037s0289.1.p 135 LKIVYTVANQAIMEAMEGEKMIHVIDLCSAEPAQWVALLQALSVRPEGPPHLRITGIHQ----QKAVLDQMAQRLNAEAERLDIPFQFNP 220
                          ***********************************************************....9************************** PP

                 GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrll.....................................desvsleserdevLklvks 233
                           v+++le+l++++Lrvk+gEala++++lqlh+ll                                      +s +l+s+ d++L  +++
  Kaladp0037s0289.1.p 221 -VVSNLECLDFDRLRVKTGEALAISSILQLHKLLswddetvrlrlpdkppnynhgtfgellekdagispdsTSSSPLSSKMDSFLMELRN 309
                          .799*****************************************************************99888889999********** PP

                 GRAS 234 lsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaG 323
                          l Pkv+vv+eq+++hn++s++er++eal+yy+alfd+le++++r+s er k+E+ l+g+ei+n++aceg++r+erhe+l kW +rl++aG
  Kaladp0037s0289.1.p 310 LLPKVMVVAEQDSNHNGSSLMERLTEALYYYAALFDCLESTVSRASLERLKIEKILFGEEIKNIIACEGRDRKERHEKLCKWVRRLGAAG 399
                          ****************************************************************************************** PP

                 GRAS 324 FkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                          F++vpls  a+  a++ll+ ++ dgyr+++e+gs+vl+W+dr+L+svSaWr
  Kaladp0037s0289.1.p 400 FGAVPLSCLAMLLARRLLQGYGCDGYRIKDENGSIVLCWQDRALFSVSAWR 450
                          **************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    
MAPTVQEDGS SSVTSSPLHF FSMMSLSPGS AHPWLKELKS EERGLYLIHL LLTCANHVAN  60
GSLESANVAL DQISQIASPD GDTMQRIASY FTDALANRIL KSWPGLYRAL NSARMLMAHE  120
EILVQKLFLE LFPFLKIVYT VANQAIMEAM EGEKMIHVID LCSAEPAQWV ALLQALSVRP  180
EGPPHLRITG IHQQKAVLDQ MAQRLNAEAE RLDIPFQFNP VVSNLECLDF DRLRVKTGEA  240
LAISSILQLH KLLSWDDETV RLRLPDKPPN YNHGTFGELL EKDAGISPDS TSSSPLSSKM  300
DSFLMELRNL LPKVMVVAEQ DSNHNGSSLM ERLTEALYYY AALFDCLEST VSRASLERLK  360
IEKILFGEEI KNIIACEGRD RKERHEKLCK WVRRLGAAGF GAVPLSCLAM LLARRLLQGY  420
GCDGYRIKDE NGSIVLCWQD RALFSVSAWR CRR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein