PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0037s0347.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB_related

Protein Properties

Length: 446aa MW: 49836.9 Da PI: 7.8615

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0037s0347.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46	1.2e-14	46	90	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT +E+++++da k++G W+ I + +g ++t+ q++s+ qk+ Kaladp0037s0347.1.p 46 REKWTDQEHQKFLDALKLYGRA-WRQIEEFIG-TKTAVQIRSHAQKF 90 789***************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MDLLQNQPPP KDTTTPPLLQ FNGSPAPHDH LVTPKLRKPY TITKQREKWT DQEHQKFLDA 60 LKLYGRAWRQ IEEFIGTKTA VQIRSHAQKF FSKVVRGGND TNESPVEAIE IPPPRPKRKP 120 THPYPRKIVD SQNNTITPSF QPEKRICPHI ATIDSENQSP NSVLSAVMSH LLELPVSEVP 180 DSCLSTSSCS TDLQSGSLYS IDKEDNLKAI NSVQYTGIDA MPTIKRSVMS TEDNLANIGN 240 GSSEEEADLA EATVMLFGQI LYKKDSQRSS TDRKGTFRLS EQHLEKTYDN KHGKLVESSA 300 SNGLDGQSPH GMYYGNWRPW SWHEMNSDSK GGNTCQWMSL PLHRGLPSPY LISCVYAPTR 360 SFVEERTYGK EPCASMVKNE STEETKDTAY AVNKVTLLDT PSLNHSYKSG FVPYKRCFTA 420 GGTNSDYDRR GGWPKSSTVP VSHLI*

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MDLLQNQPPP KDTTTPPLLQ FNGSPAPHDH LVTPKLRKPY TITKQREKWT DQEHQKFLDA  60
LKLYGRAWRQ IEEFIGTKTA VQIRSHAQKF FSKVVRGGND TNESPVEAIE IPPPRPKRKP  120
THPYPRKIVD SQNNTITPSF QPEKRICPHI ATIDSENQSP NSVLSAVMSH LLELPVSEVP  180
DSCLSTSSCS TDLQSGSLYS IDKEDNLKAI NSVQYTGIDA MPTIKRSVMS TEDNLANIGN  240
GSSEEEADLA EATVMLFGQI LYKKDSQRSS TDRKGTFRLS EQHLEKTYDN KHGKLVESSA  300
SNGLDGQSPH GMYYGNWRPW SWHEMNSDSK GGNTCQWMSL PLHRGLPSPY LISCVYAPTR  360
SFVEERTYGK EPCASMVKNE STEETKDTAY AVNKVTLLDT PSLNHSYKSG FVPYKRCFTA  420
GGTNSDYDRR GGWPKSSTVP VSHLI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	6e-34	MYB_related family protein