PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0386.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 169aa    MW: 19162 Da    PI: 9.1228
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0386.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF59.15.3e-192470349
                         --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
               SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                         i+  s rqvtfskRr+g++ KA+EL vLC+ae a+i +s   k+y +
  Kaladp0037s0386.1.p 24 IKCPSARQVTFSKRREGLFRKASELAVLCGAEFAIIAISGGSKVYSF 70
                         677789**************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MMRSDEQVTR KRTRGRRKIP IEKIKCPSAR QVTFSKRREG LFRKASELAV LCGAEFAIIA  60
ISGGSKVYSF GNPDAGTVIN HYLNKRKMMR DYHSIVDEEA IGSYVRAVEA LEGEKRKLAA  120
ERGGGGKGFE EWKEEKIQEM SLEEMEEYLK WLECLRTEIV EKIGEPSA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-24M-type_MADS family protein