PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0405.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 253aa    MW: 28460.5 Da    PI: 5.9616
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0405.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.16.4e-112361248
                         HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
  Kaladp0037s0405.2.p  2 IIHLQALLGNK-WAAIASYLP-ERTDNDIKNYWNTHL 36
                         5788899****.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MIIHLQALLG NKWAAIASYL PERTDNDIKN YWNTHLKKKL DNRYQQTMEQ PHHHYLINSS  60
QQLHHPSNNM GAASSSTSSS NNGVITCVHN NDSPSPLLHA TTNSSSLTSS SHYASSTENI  120
SRLLEGWMRT SPKTNNKQLI IRSSRSEHES SCEDLIVVGM EEDEAVVVPN KDDDTAGHEM  180
TMWGKGRNEC FDKEMMMMMM KQQLDEEGGN DSSHGHQRHN NPPFSIFEKW LFEETSNSGG  240
GQVEEMQLSP IF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.16e-24MYB family protein