PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0437.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 247aa    MW: 27680.3 Da    PI: 9.1289
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0437.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF80.51.1e-25953145
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                         k+ien++nrqvtfskRrng+ KKA+ELSvLCd++ a+i+fs++g+
  Kaladp0037s0437.1.p  9 KKIENTTNRQVTFSKRRNGLVKKAYELSVLCDIDLALIMFSPSGR 53
                         68****************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MGRVKLEIKK IENTTNRQVT FSKRRNGLVK KAYELSVLCD IDLALIMFSP SGRPSLFSGK  60
KSSFEQILNR YTSLPEHERG RIFEGNPSDI TTLAEVNYNE KILEDTLKRV RMRKVQVAQD  120
FMLVNDGHGV SWTPNMYSLD SLGMQVQRRT PQLQILNFIG SGCLPPASRS ELRRSIEMSP  180
QHQTSNLISL HNLQGSHEHS LSPSSGTEIE NNNINQAASH YNGCGAQPFD VNISPWTQFY  240
TPATGL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.15e-36MIKC_MADS family protein