PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0482.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 335aa    MW: 37459.4 Da    PI: 6.5077
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0482.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.26.9e-171461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT++Ed +l ++++++G g+W+t ++  g+ R++k+c++rw +yl
  Kaladp0037s0482.1.p 14 KGPWTADEDVKLREYIERHGAGNWRTLPQNAGLQRCGKSCRLRWTNYL 61
                         79********************************************97 PP
2Myb_DNA-binding551.9e-1767111147
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          rgr++ eE+e +++++ +lG++ W++Ia++++ gRt++++k++w+++
  Kaladp0037s0482.1.p  67 RGRFSFEEEEAIIQLHSLLGNK-WSAIAARLP-GRTDNEIKNYWNTH 111
                          89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MGRAPASSSS GLKKGPWTAD EDVKLREYIE RHGAGNWRTL PQNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEEAIIQ LHSLLGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
LDPVTHAPRL HHLPHSTSHL NDNLANLLFF LNQQQQMVNP QLLNIATTLL ALNQQPNQTL  180
FNDNSTHVSE DEKFDAYAPQ IHDHQFQPYN SSSFLQSNNQ HAGGFSTSSS TGMDDLSAHE  240
SWYGFSSSNV GGCSQMLLPP LVHDEKAAAT SSSFGSLNNN QQQQQLSTYT AATPFTSYTS  300
SPLDSSYTSN GFSTEDDIDS ILNFEIPDLT ELLY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.18e-83MYB family protein