PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0037s0484.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 261aa MW: 28752.2 Da PI: 5.4158

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0037s0484.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.3	2.3e-15	19	66	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ eEd +lv +v+++G +W+ ++ g+ R++k+c++rw++yl Kaladp0037s0484.1.p 19 KGAWSVEEDIKLVAYVTKYGCWNWRQLPKFAGLARCGKSCRLRWLNYL 66 79****************99**********************97 PP
2	Myb_DNA-binding	47.7	3.5e-15	72	114	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+ T+eE++ ++++++ G++ W+ Ia+ ++ gRt++++k++w+ Kaladp0037s0484.1.p 72 RGNYTKEEEDTIIRLHESVGNK-WSVIAAQLP-GRTDNEIKNHWH 114 899*****************.*****.*********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MGRRPATATA APIESGLRKG AWSVEEDIKL VAYVTKYGCW NWRQLPKFAG LARCGKSCRL 60 RWLNYLKPDL KRGNYTKEEE DTIIRLHESV GNKWSVIAAQ LPGRTDNEIK NHWHGKLKKM 120 LKTTPSLKDK SKATSSSLTS EEVSSTCSTY KGLTDLEADK TPTDDSVSCC LQGQQKQSSS 180 SSASSSSDDM YSDMSGDLWK DPFVADGAYN YVGPADDYFH YVDSFAAAAD IGYEGLLSFP 240 CPSDVPTADE DEFLVPLWLA *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06180.1	6e-52	MYB family protein