PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0038s0004.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 233aa    MW: 26588 Da    PI: 6.7686
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0038s0004.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.12.3e-067192626
                         -SGGGGT.S--TTTTT-SS-SS CS
              zf-CCCH  6 Crffart.GtCkyGdrCkFaHg 26
                         C++f ++ G+C+ G+ C+FaHg
  Kaladp0038s0004.1.p 71 CPNFKANdGECPLGEACCFAHG 92
                         666655426************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MRGRITAVYQ YRDPRVDDAY YSSDEFRMFG FKILPCPRTR SHDWTDCPLA HRGEKAQRRD  60
PSVFNYMAIA CPNFKANDGE CPLGEACCFA HGIFEYWLHP AKYRTRPCHM GHLCQRKVCF  120
FAHGPHQLRT EIKYKVQWSN NNSLDGVTQI DSLTGLPIPK STAADGFDPM KPHFDSNSRQ  180
RLSSINETEV TRRLGELSVV EGIPTDAGFA CLPNLPEIDW VSQLLDDENI DW*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07500.12e-61C3H family protein