PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0038s0010.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 557aa    MW: 62753.5 Da    PI: 6.5455
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0038s0010.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.53.1e-5061331128
                  NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                          lp G+rF+Ptdeel+++yL++k++g+++++ ++i+e+d++k+ePw+Lp    + ++  ew+fF+ rd+k ++++r nrat++gyWkatgk
  Kaladp0038s0010.1.p   6 LPLGYRFRPTDEELIDFYLRNKINGQHHHV-KIIREIDVCKWEPWELPgLsVLPSDGGEWFFFAARDQKFPNSQRLNRATQRGYWKATGK 94 
                          699************************999.89***************6335566777******************************** PP

                  NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                          d+++++ +g++vg+k+tLvfy+grap+g++t+Wvmheyr 
  Kaladp0038s0010.1.p  95 DRKIKK-RGRDVGMKRTLVFYTGRAPSGKRTNWVMHEYRT 133
                          *****9.999****************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 557 aa     Download sequence    
MSLYALPLGY RFRPTDEELI DFYLRNKING QHHHVKIIRE IDVCKWEPWE LPGLSVLPSD  60
GGEWFFFAAR DQKFPNSQRL NRATQRGYWK ATGKDRKIKK RGRDVGMKRT LVFYTGRAPS  120
GKRTNWVMHE YRTILKELDA THPGQGAYVL CRLFKKNDDT IEDSHHDEVQ SVPTSPVSAA  180
SNLHIKSETE DFFTSGHINN LDPGRCVAGN FDKPAPLPLT SGEGSNMCCS HLDSSGTQPR  240
DITETIMTMT AINSTSQSHL QGDLGSSFPI TSSFNECEWP LQCGMGKQND IFEYLDSVEI  300
HDLRRDIDSH EKISPFQDET MDTDHVLKLT ISRDESNFGR GLDPEVSLEQ LFTELEGNCL  360
SDTGHAIPAF SESAADPENT LFNSDDLEFD LKHYFEDVSF DGSLFYQLSN SSKEESGTSA  420
IGDTGITLRA SNQVNQPGTF DFQSQGTAAR RILLQRRVGS VYHCNHAISH QLEAKSVVSQ  480
EVDLNNVKLI SRTIAPRKWP LFASHGKSKR RPEEFHIRLA KKHKIWAAFA AVLFTVLIAF  540
PGMKLLGKTH MLLDWP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.19e-72NAC family protein