PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0038s0108.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 441aa    MW: 47572 Da    PI: 5.986
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0038s0108.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS389.53.7e-119714323374
                 GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                           lLl+cAe+++ ++l++a+ lL ++sel+sp g++ +R+aayf+ AL+ar+ +s+ ++y+ l+ ++ + ++  +  +a++ ++ +sP++k
  Kaladp0038s0108.1.p  71 GLLLQCAECIAMDNLSEASDLLPEISELSSPFGSSPERVAAYFAHALQARIISSCLGTYSPLNIKTLTASHNHRISNAFQSYNSISPLIK 160
                          58**************************************************************************************** PP

                 GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
                          fsh+taNqaI +a+ege+rvH+iD+di+qGlQWp L++ LasRp++  s+RiTgvgs    s++ le+tg+rLa+fA++lg+pfef+++ 
  Kaladp0038s0108.1.p 161 FSHFTANQAIFQALEGEDRVHVIDLDIMQGLQWPGLFHILASRPRKIKSVRITGVGS----SSDLLEATGRRLADFASSLGLPFEFHPFE 246
                          *********************************************************....9**************************99 PP

                 GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsl 271
                           k  + ++l++L v+ gEa++V++++  h l+d ++s       +L+l+  l+Pk++++veq+++h +++sFl rf+eal+yysalfd+l
  Kaladp0038s0108.1.p 247 GKVGNIVDLSQLGVNCGEAVVVHWMH--HCLYDITGSDFG----TLRLLSLLKPKLITIVEQDLSHgGGGSFLGRFVEALHYYSALFDAL 330
                          999999******************99..777766777777....**********************9999******************** PP

                 GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlg 361
                            +++ +s er++vE++l+g+ei+n+va  g +r+ + + +e+W + l++aGF+pv+l+ + a+qa+lll +++++gy++ eesg+l lg
  Kaladp0038s0108.1.p 331 GDGAGGDSIERHTVEQQLFGWEIRNIVAVGGPKRTGEVK-VERWGDELGRAGFRPVSLGGSPAAQASLLLGMFPWKGYTLVEESGCLKLG 419
                          9999*****************************998887.9************************************************* PP

                 GRAS 362 WkdrpLvsvSaWr 374
                          Wkd +L+++SaW+
  Kaladp0038s0108.1.p 420 WKDLSLLTASAWE 432
                          ************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MLQSLVVSHS SIPTKTSLGM KTKRADRELS CAGVEDDSLL ASGKRPNNVC PAEDESAEEQ  60
GGESSGLRLL GLLLQCAECI AMDNLSEASD LLPEISELSS PFGSSPERVA AYFAHALQAR  120
IISSCLGTYS PLNIKTLTAS HNHRISNAFQ SYNSISPLIK FSHFTANQAI FQALEGEDRV  180
HVIDLDIMQG LQWPGLFHIL ASRPRKIKSV RITGVGSSSD LLEATGRRLA DFASSLGLPF  240
EFHPFEGKVG NIVDLSQLGV NCGEAVVVHW MHHCLYDITG SDFGTLRLLS LLKPKLITIV  300
EQDLSHGGGG SFLGRFVEAL HYYSALFDAL GDGAGGDSIE RHTVEQQLFG WEIRNIVAVG  360
GPKRTGEVKV ERWGDELGRA GFRPVSLGGS PAAQASLLLG MFPWKGYTLV EESGCLKLGW  420
KDLSLLTASA WEPCDHRPST *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-168GRAS family protein