PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0039s0287.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 343aa MW: 39243.7 Da PI: 5.5058

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0039s0287.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.7	6.4e-19	45	92	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l +++q+G g+W++ ar g++Rt+k+c++rw++yl Kaladp0039s0287.1.p 45 RGPWTDEEDHILSSYIAQHGEGRWNSLARSAGLNRTGKSCRLRWLNYL 92 89********************************************97 PP
2	Myb_DNA-binding	49.9	7.2e-16	98	141	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ + eE++l++d++ ++G++ W++Ia++++ gRt++++k++w++ Kaladp0039s0287.1.p 98 RGNISLEEQLLILDLHSRWGNR-WSKIAKYLP-GRTDNEIKNYWRT 141 78899***************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MNNHHDGRGV FTANNNSSSS SSSSWSKQSQ EEEHEDVMME EDLRRGPWTD EEDHILSSYI 60 AQHGEGRWNS LARSAGLNRT GKSCRLRWLN YLRPDVRRGN ISLEEQLLIL DLHSRWGNRW 120 SKIAKYLPGR TDNEIKNYWR TRVQKHAKLL KCDVNSQQFR DAIRYLWMPR LVERIHGAAS 180 ATDDIHNTTT TCLFHHNNNN NHTAAGFTNP SGMMREDEPY GSYLQHQQVS PFSDLMDDYA 240 PADDINSEYY YNGGAGNDSA VKAVGFDCNN YIDQTGVMMG YGGGDQMHPN NNNNSNSDNG 300 WLMMQSGDVS DSMWSLDDFW FNNSQPPQQD YQQQQFNTNS FS*

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MNNHHDGRGV FTANNNSSSS SSSSWSKQSQ EEEHEDVMME EDLRRGPWTD EEDHILSSYI  60
AQHGEGRWNS LARSAGLNRT GKSCRLRWLN YLRPDVRRGN ISLEEQLLIL DLHSRWGNRW  120
SKIAKYLPGR TDNEIKNYWR TRVQKHAKLL KCDVNSQQFR DAIRYLWMPR LVERIHGAAS  180
ATDDIHNTTT TCLFHHNNNN NHTAAGFTNP SGMMREDEPY GSYLQHQQVS PFSDLMDDYA  240
PADDINSEYY YNGGAGNDSA VKAVGFDCNN YIDQTGVMMG YGGGDQMHPN NNNNSNSDNG  300
WLMMQSGDVS DSMWSLDDFW FNNSQPPQQD YQQQQFNTNS FS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G48000.1	5e-82	MYB family protein