PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0039s0358.4.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YA
Protein Properties Length: 214aa    MW: 23836.5 Da    PI: 9.5777
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0039s0358.4.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.69e-33118174158
            CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                          +ep++VNaKQy++Il+RRq+Rak+e+ekkl +ksrkpylheSRh hAlrR+Rg+gGrF
  Kaladp0039s0358.4.p 118 EEPVFVNAKQYHGILRRRQSRAKAESEKKL-AKSRKPYLHESRHLHALRRARGCGGRF 174
                          69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MKKNPKITSS VHDPSDYSEA EERQNLTEPQ NQAATDVMMS HSGVRAPNVQ YTTPLQLGTG  60
HTMAPGAYPY PDPYYRSIFA PYDPPSFPSQ SYNPQPMVHM QLMGMQQAGV PLHTDAVEEP  120
VFVNAKQYHG ILRRRQSRAK AESEKKLAKS RKPYLHESRH LHALRRARGC GGRFLNGKKN  180
DNQQNEVPTG DSSQLNALDN SSRANNVQSD GTY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.21e-43NF-YA family protein