PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0039s0445.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family BBR-BPC
Protein Properties Length: 100aa    MW: 11037.8 Da    PI: 8.9444
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0039s0445.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind1566.6e-48698194286
            GAGA_bind 194 idlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpv 283
                           +l+ln+ +lD+ +lPvP  sCtG++r CYkWGnGGWqSa Ctt++S+yP+P ++++r++R+ g KmS++af+k   +La++Gyd+  p+
  Kaladp0039s0445.1.p   6 GELSLNELNLDDVNLPVPFYSCTGKPRSCYKWGNGGWQSARCTTALSMYPMPLMPNKRHSRMDGCKMSGNAFTKPTTRLATDGYDITVPI 95 
                          5899************************************************************************************** PP

            GAGA_bind 284 DLk 286
                          D+k
  Kaladp0039s0445.1.p  96 DMK 98 
                          **9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MVEAKGELSL NELNLDDVNL PVPFYSCTGK PRSCYKWGNG GWQSARCTTA LSMYPMPLMP  60
NKRHSRMDGC KMSGNAFTKP TTRLATDGYD ITVPIDMKK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.14e-39BBR-BPC family protein