PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0039s0505.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 274aa    MW: 31001.3 Da    PI: 6.7182
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0039s0505.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.62.4e-171966148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg+WT eEd  l++ ++ +G g+W++ ar  g++Rt+k+c++rw++yl
  Kaladp0039s0505.1.p 19 RGSWTVEEDTMLIHHITAHGEGNWNSLARSSGLKRTGKSCRLRWLNYL 66
                         89********************************************97 PP
2Myb_DNA-binding45.71.5e-1472116146
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                          rg+ T++E   + +++ ++G+ +W++Ia+ ++ gRt++++k++w++
  Kaladp0039s0505.1.p  72 RGNLTPQEKSTIFQLHSKWGNSRWSKIAQQLP-GRTDNEIKNYWRT 116
                          7999****************************.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MSARNCGADE PVQQSELRRG SWTVEEDTML IHHITAHGEG NWNSLARSSG LKRTGKSCRL  60
RWLNYLKPDI KRGNLTPQEK STIFQLHSKW GNSRWSKIAQ QLPGRTDNEI KNYWRTRMQN  120
QARQLKRVQS DRFLESVRGF WVPTTTLDVK GDADYSSLVS NSSSQQQLKN RHHHPLSCSS  180
PSSFVFPREA DDSMGFLELK TVVDSPSANT TAGAYKYPEF YHSLEDLSFA TTMSAAAAAD  240
DDCGLLQAAR DDWMADDETT DTAWNTDELW QFS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.11e-64MYB family protein