PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0039s0533.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 272aa    MW: 30402.6 Da    PI: 8.557
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0039s0533.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.9e-171360148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+W+++Ed++l+d+++++G g+W+t ++  g+ R++k+c++rw +yl
  Kaladp0039s0533.1.p 13 KGAWSKQEDQKLIDYIRKYGEGCWRTLPKDAGLLRCGKSCRLRWINYL 60
                         79******************************99************97 PP
2Myb_DNA-binding51.91.8e-1666111148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
  Kaladp0039s0533.1.p  66 RGNFAEDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSHL 111
                          8999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MRKPCCDKQG TNKGAWSKQE DQKLIDYIRK YGEGCWRTLP KDAGLLRCGK SCRLRWINYL  60
RPDLKRGNFA EDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH LRRKLINQGI  120
DPNNHKIIRH TSLHHQYPSQ NYQVPAATTL SHLHRSSNHK PQKGEEPNYK PAATNCNMII  180
NTVDDDAGQA IISEEAASSV EEAAPCSSCP LLPDLNLDLM ICTPSHLLGQ KSKPNDNEVA  240
ATKDHHQRQV VEAAAAGGLQ ALVHMIKIGL C*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.18e-77MYB family protein